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Defacing

The first step before releasing the data is to deface the T1w and T2w images for all sessions. To perform defacing, we are using a software called PyDeface (Gulban et al. 2019). To proceed, run the following command in the command line:

    bash ./code/defacing/run_pydeface.sh

References

[1]: Gulban, Omer Faruk, Dylan Nielson, Russ Poldrack, John Lee, Chris Gorgolewski, Vanessa Sochat, and Satrajit Ghosh. 2019. “Poldracklab/Pydeface: V2.0.0.” Zenodo. doi: 10.5281/zenodo.3524401.